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Kinetics of Protein Binding

  • Kinetics of Protein Binding describes the interaction between a drug (D) and a protein (P) to form a drug-protein complex (DP).

  • This process follows a reversible equilibrium:



Rate of Drug-Protein Binding

  • The association and dissociation of drug-protein binding follow the rate equation:



where:

  • [D] = Free drug concentration

  • [P] = Free protein concentration

  • [DP] = Drug-protein complex concentration

  • [Kon] = Rate constant for drug-protein association

  • [Koff] = Rate constant for drug-protein dissociation

Equilibrium Dissociation Constant (K_D)

  • At equilibrium, the dissociation constant (Kd) is given by:



  • A lower Kd ​indicates stronger drug-protein binding.

  • A higher Kd suggests weaker binding.

Fraction of Bound and Unbound Drug (Kinetics of Protein Binding)

Bound Drug Fraction ()

  • The fraction of the drug that is bound to the protein is:



where:



  • (i.e., the total drug concentration is the sum of free and bound drug concentrations).

Unbound Drug Fraction ()

  • The fraction of the drug that remains unbound is:



  • Since the total drug must be either free or bound:



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